CDS

Accession Number TCMCG048C23407
gbkey CDS
Protein Id XP_031284854.1
Location join(1140592..1141168,1141251..1141311,1141401..1141558,1141908..1141993,1143290..1143394,1143529..1143626,1143892..1144012,1144618..1144800,1144952..1145144,1145331..1145905,1147624..1147786,1149040..1149317,1149455..1149642,1150413..1150489,1150606..1150952,1151478..1151546,1151647..1151965,1154391..1154519,1154909..1155017,1155117..1155188,1155306..1155429,1156252..1156359,1156719..1156859,1157546..1157719,1157815..1157859)
Gene LOC116143545
GeneID 116143545
Organism Pistacia vera

Protein

Length 1499aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA578116
db_source XM_031428994.1
Definition nuclear pore complex protein NUP160 isoform X2 [Pistacia vera]

EGGNOG-MAPPER Annotation

COG_category UY
Description Nuclear pore complex protein NUP160 homolog
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14303        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016973        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031965        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCAAGTAAATGGAGGTGGGCGGGGACGGAAGTGCCGATCATCGGTAGCGACTCCTTTAAATTTATTGAGATTTCGGTTTCTTCTTCTAGTAGTAATGTACAGTCACAGTCACATTCTAATTTTATTGCTCCTCGTGCTGATGGTTACGCTTCATGCGCTCTTGTTGGTGATCCTTCTCTCCATCTCATTTTGCGAATTCGCGAGAGTCTTCCTAATTCACTCGACCTACTCCCTTTCTCTTTTTCTAAGCCATTTCCCATTCTTGGTTTGCGAATCAATTTCCCTTGTAAACTGTCTTCTTTTGCTTTTCTTTTTGAACTCGCCCCCAATGTTTACTCGCTTTGTGTCTTATCCGTTTCTGGAATCGTTTTCATTCTCAAACTTTCTGCAAATTTCTCTGATTATGAAACCTATCCTATTTTTCCACAAGAAGACCTTTTACAGTTTAATTTGGTAAATTATGGAGACATTCCCATAACAAGTGCAGCCGCCACTTCTGGATGCCTGGTTGTGGGCAGAAATGATGGATCTGTTGCTTTTTTTCAACTTGCCACTCATCACCCCACCGCTCCTGGTTTTGTGCAGGAGCTACGGGACGATTCAGGAATTGGTCGTTTGTGGGGTTTAATGTCAAGGGGTAGGATGGTAGGGGCTGTCCAGGATTTGGTTATAACAGAGGTGCAAGGGAAAATACTGGTGTATGTGCTTCATTCTGGTGGCATTTTTCGAGTATGGGATCTTTCTTCTCGGAGCAGAATATTTAGTCATACAATTACCAATCCATCAGTGGAAGGAGCTCCATTTGTGAGGTTGTGGGTGGGTGAAACTAATTCCAACTCAAGTGTTATTCCTTTGGCAATCTGGTATAGATATACTTCGGAAGTTGGCATGGAGGCAATCGATGTATATAGTCTTCAATGTAGTTGGGGGAAAGAGCCGATATTGTCACTGGAACCCTCAATGCTAAATGTTCCAATGGAGGAGGGTTCATGCATTGATGTCAAACTTGCCTCAGACAGGATATGGATATTGAAGGATAGTGGATTGGTAGTTCACAATTTGTTCCATAAGGATGGTCTTGTGGAAGAAGCACACTGTTATGCTTTGCAGGAAGAGTTTGTTGCTGACATGCTTTTTCAAAGTTCTGAACATCCATCTGATGATCTTCTGTCAATTACCCATTCAATAGTTACATCTCCCAAGGATTACGTTGTTCTGTTTTTATCTTCTATTTTCATACGCAGGCTGCTTCATCCTGGGGTTCATCATAATATGGTTTTACGTGCAACTTTGCTGGATTATAATAGGCACTGGACTGATTCTGAGTTTCAGTCTTTAACTGTCGATGGACTTAAAAAGGAGATCATTTCACTTGTTGAACATGAGGGCATTGCTGAAAATCCTCTGTCCATATTTTATGGCTGGAAGAATTTCTGTTCTCGTTATTTCCATCACTGGTGCAAGATCAATGAGCCATATGGTTTGTTTGTTCACCCTTCAACAGGTGCTGTTGGTTTACTCCGAAAGAATTCAGTATCTGTGTTTCGTGATCTAGAAAAAATTGAGCTGCTTATTGATGGTTCTTCTGATGAATTTGATGATCAGCCAACAAGTTTTGGGTTGGAGTTTTCGGATGATGGTTCTGAACGTGAGATTCTTTTCGAAGTGCTTAGATGTATTACTAGCATCAGCCAACAATTGGGGAAAACAGCTTCTGCAATATTTTATGAATCACTTGTGGGCACATCAATTATCTCAGCTGAAGAAATTGTTCCTCGCTTACTGAAAATTCTAGAAACAGGATATGGTTCATCAGTAACGGCACTCAATATATCAGATCTTGGAGCTGATGTTGCTAGAGAGAAGGAGCTTGTAGATCACAAAAATCTTAGGAAATTTTCTGTCGACATGCTACTGTCTCTTCATGCTGTGGGCAAAAAGGCTGCATCTTGGGATAGAGTCCTAAATGTCATCGAGAGCTATCTGCAGTTTCTTGTACCTTGCAAAATCATACAAAATTTTGACTCTGAAATAGTTTTGAATATCAATACTTTCATTTTAGTCCAGGCAACTTCTCAAATTGCGAAGGTGATGTTTGAGTCTACATTAGATGTTCTTCTGTTTGTAAGCTATTTGGTGAACATCAGTGGCCAGATTAGTATGTTGCATGATGACATAGCAAGAATACAACTTGAGTTGATTCCGATGATTCAAGAAATTGTTACTGAGTGGCTTATCATTCTCTTTTTTGGCACCACACCTTCTGAATCACCTGCAATAGAAGATTTCAGCTCTCAACTTTCATCATTACAAATTGATAGCAACATTGGGAAAAGATCATGGAATGAGAAGCTTGGCAAATGCGATTTCACCTTAGCTTTTATACTTTTACTAAATAATCAAAGTTCCTTGGGAGATCCTAGCTGCATCTTACCAAGATGTCTCCCTAATCCACAAGAAGTTACTGGTTCAGTTCGGGGCTTTACTAGCTGGATCATTTGGGGCAAAACTGGGGAGGAATCTTCTTCTTTCTTGCGGCATTCAACTCAGCTTGCACTGATCCTGCTTAAGCATGGCCAGTATGATGCTGTTCAGTACCTACTTACCCTTGTGGAGTCAAATTCGCAAAAGGAGAAAATATTTAGAAGTATCCAAGATACTGGTGGTGATTGGTCTCTTCTTCAACATCTTTTGGGATGTTGCCTTCTGGCACAAGCACAATGTGGATTACCTGGAATTCTTAAAGAGAAGAAAGTCACTGAAGCTGTTCGTTGTTTCTTCAGAGCTTCATCTGGACAAGGAGCTTGTGAGGCTTTGCAAAGTTTATCTTACAAAACAGGGTTGCCACATCTTGGTTTAAATGGTTGTTTGTCATCTGCTGCATGGAAGCTTCATTACTATCAATGGGCAATGCAGATATTTGAGCAATATAATAGTAGTGAAGGTTCTTGCCAGTTTGCTCTTGCTGCACTTGAGCAAGTTGATGAAGCTGTTGGTCCAGAAGATGATTGTTATGGTGGAAATCCACAAAATGAATCAGCCACTACTATCAAAGGGCGACTTTGGGCGAATGTCTTCAAATTTACTTTAGATCTTAATCTTTTACATGATGCATACTGTGCAATAATTTCAAATCCTGATGAGGAGAGCAAATACATCTGCCTGAGACGTTTTGTTATAGTTCTCTACGAGCGCAAAGCAACAAAGTTTCTTTGTGATGGTCAACTACCCTTCATTGGTTTAGCAGAGAAGATTGAACGAGAGCTTGCCTGGAAGGCAGAACGTTCAGATGTCTTGGCGAGACCAAACCCATATAAGTTGCTTTATGCATTTGAAATGCAAAGGCATAACTGGAGAAGGGCAGCTACTTACATATACCTGTATTCTGCTCGTTTGAGAAATGGACCACTTCCAAAAGATCACCAGCAGATTTTATTGGTGCTTCAAGAGAGGCTGAATGGGCTTTCTGCAGCTATCAATGCCCTGCATCTTGTTCATCCTACATATGCTTGGATTGATCCTTTGCTTGGGCAAACTTCTTTTCAAAATGAGAATTATCCTAGTAAAAAGGCTAAAAAGATGGTAAAAGAACAATTGGCTGGCAATGATATTCAACCTCAAAGGCTGCATTCATATATAGATATTCAGAAACTTGAGAAAGAGTTTGTGCTAACTTCGGCTGAATACTTACTCTCAGTGGAAAATGTCAAATGGACATTTAATGGAATTGACAAAGCCCCATTAGATTTGGTTGATCTGCTGGTCCAGAAAAATTTGTATGATATGGCATTTACAGTTCTTTTAAACTTTTGCAAGGGTTCAAGATTGAAGAGTGAATTGGAGAGAGTTTTCTCTGCTATGTCATTAAACTGTTGTCCGAGTAAAGCAGGTTCCTCTTATAGCGGGACTCCCGGTCTCTTGCTTACATCATCAAAAGATGAAGTGGTTGTTCATGGTTCTCCTGATAACATACCAACCACTAAACAACACAAGGCGAATGGTCAATGGGAAACCCTTGAGCTCTATCTTGAAAAATATAAAGATTTCCATGCTGGATTACCAGTAGTTGTTGCTGAGACACTTCTTCGCATGGATTCAGAGATTGAGTTGCCTCTATGGTTGGTTCATATGTTCAAGGATGGTCAAAGAGATAGGACCAAGGGTATGACTGGCCAAGAATCAAGTCCTGCATCCTTGTTTCGACTATATGTTGATTATGGTCGATATACAGAGGCAACAAATTTGCTGCTGGAGTACATAGAGTCATTTGCGTCAATGAGACCAGCTGACATTATTAATAGGAAAAGACCATTTGCTGTTTGGTTCCCATACACAACAATAGAGCGTCTATGGTGCCAACTCGAGGATATGACCAGGTTGGGTCACATGGTTGATCAGTGTGAAAAGCTAAGAAGGATACTACATGGAGCTTTGCTGAAACATCTCAAGCTGCAAAAGGTGGACTCGGACGACGCAATTTTTTCTGCATCCGGTTAA
Protein:  
MSSKWRWAGTEVPIIGSDSFKFIEISVSSSSSNVQSQSHSNFIAPRADGYASCALVGDPSLHLILRIRESLPNSLDLLPFSFSKPFPILGLRINFPCKLSSFAFLFELAPNVYSLCVLSVSGIVFILKLSANFSDYETYPIFPQEDLLQFNLVNYGDIPITSAAATSGCLVVGRNDGSVAFFQLATHHPTAPGFVQELRDDSGIGRLWGLMSRGRMVGAVQDLVITEVQGKILVYVLHSGGIFRVWDLSSRSRIFSHTITNPSVEGAPFVRLWVGETNSNSSVIPLAIWYRYTSEVGMEAIDVYSLQCSWGKEPILSLEPSMLNVPMEEGSCIDVKLASDRIWILKDSGLVVHNLFHKDGLVEEAHCYALQEEFVADMLFQSSEHPSDDLLSITHSIVTSPKDYVVLFLSSIFIRRLLHPGVHHNMVLRATLLDYNRHWTDSEFQSLTVDGLKKEIISLVEHEGIAENPLSIFYGWKNFCSRYFHHWCKINEPYGLFVHPSTGAVGLLRKNSVSVFRDLEKIELLIDGSSDEFDDQPTSFGLEFSDDGSEREILFEVLRCITSISQQLGKTASAIFYESLVGTSIISAEEIVPRLLKILETGYGSSVTALNISDLGADVAREKELVDHKNLRKFSVDMLLSLHAVGKKAASWDRVLNVIESYLQFLVPCKIIQNFDSEIVLNINTFILVQATSQIAKVMFESTLDVLLFVSYLVNISGQISMLHDDIARIQLELIPMIQEIVTEWLIILFFGTTPSESPAIEDFSSQLSSLQIDSNIGKRSWNEKLGKCDFTLAFILLLNNQSSLGDPSCILPRCLPNPQEVTGSVRGFTSWIIWGKTGEESSSFLRHSTQLALILLKHGQYDAVQYLLTLVESNSQKEKIFRSIQDTGGDWSLLQHLLGCCLLAQAQCGLPGILKEKKVTEAVRCFFRASSGQGACEALQSLSYKTGLPHLGLNGCLSSAAWKLHYYQWAMQIFEQYNSSEGSCQFALAALEQVDEAVGPEDDCYGGNPQNESATTIKGRLWANVFKFTLDLNLLHDAYCAIISNPDEESKYICLRRFVIVLYERKATKFLCDGQLPFIGLAEKIERELAWKAERSDVLARPNPYKLLYAFEMQRHNWRRAATYIYLYSARLRNGPLPKDHQQILLVLQERLNGLSAAINALHLVHPTYAWIDPLLGQTSFQNENYPSKKAKKMVKEQLAGNDIQPQRLHSYIDIQKLEKEFVLTSAEYLLSVENVKWTFNGIDKAPLDLVDLLVQKNLYDMAFTVLLNFCKGSRLKSELERVFSAMSLNCCPSKAGSSYSGTPGLLLTSSKDEVVVHGSPDNIPTTKQHKANGQWETLELYLEKYKDFHAGLPVVVAETLLRMDSEIELPLWLVHMFKDGQRDRTKGMTGQESSPASLFRLYVDYGRYTEATNLLLEYIESFASMRPADIINRKRPFAVWFPYTTIERLWCQLEDMTRLGHMVDQCEKLRRILHGALLKHLKLQKVDSDDAIFSASG